Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas mediterranea |
| Strain | 9.1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1229552 bp
Thymine Count
1232435 bp
Guanine Count
1942212 bp
Cytosine Count
1941936 bp
Genome Length
6346235 bp
Protein-coding Genes
5363 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease accessory protein | SAMN05216476_5850 | Q3KIS7 | Positive | 6266527 - 6267369 | 30359.6 |
| urease subunit gamma | SAMN05216476_5851 | Q4KJ06 | Positive | 6267546 - 6267848 | 11052.5 |
| phosphinothricin acetyltransferase | SAMN05216476_5852 | A6VCX3 | Positive | 6267859 - 6268392 | 19539.3 |
| acetyltransferase | SAMN05216476_5853 | P16966 | Positive | 6268399 - 6268932 | 19566.4 |
| urease subunit beta | SAMN05216476_5854 | Q3KIT1 | Positive | 6268929 - 6269234 | 11128.2 |
| urease. metallo peptidase. merops family m38 | SAMN05216476_5855 | Q3KIT2 | Positive | 6269358 - 6271058 | 60584.6 |
| chaperone modulatory protein cbpm | SAMN05216476_5856 | B1J5W6 | Negative | 6271197 - 6271496 | 11413.8 |
| curved dna-binding protein | SAMN05216476_5857 | Q88DH7 | Negative | 6271549 - 6272487 | 34074.2 |
| hypothetical chaperone protein | SAMN05216476_5858 | P36928 | Positive | 6272783 - 6274048 | 46257.3 |
| predicted purr-regulated permease perm | SAMN05216476_5859 | Not Available | Negative | 6274145 - 6275158 | 36821.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tomato pith necrosis | Causes | PMC12847849 |
| Pith necrosis | Causes | PMC12847849 |






