Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas mediterranea |
| Strain | 9.1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1229552 bp
Thymine Count
1232435 bp
Guanine Count
1942212 bp
Cytosine Count
1941936 bp
Genome Length
6346235 bp
Protein-coding Genes
5363 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | SAMN05216476_5809 | Q9HUW6 | Positive | 6214016 - 6215962 | 69191.4 |
| 3-dehydroquinate dehydratase | SAMN05216476_5810 | A4VPK2 | Positive | 6216512 - 6216964 | 16344.6 |
| biotin carboxyl carrier protein | SAMN05216476_5811 | P37799 | Positive | 6217013 - 6217483 | 16433.7 |
| biotin carboxylase /acetyl-coa carboxylase carboxyltransferase subunit alpha | SAMN05216476_5812 | P37798 | Positive | 6217501 - 6218856 | 48852.8 |
| hypothetical protein | SAMN05216476_5813 | Not Available | Negative | 6218921 - 6222868 | 146267.0 |
| [lsu ribosomal protein l11p]-lysine n-methyltransferase | SAMN05216476_5814 | Q3KIP5 | Positive | 6223113 - 6223991 | 31600.4 |
| mj0042 family finger-like domain-containing protein | SAMN05216476_5815 | Not Available | Positive | 6224022 - 6225257 | 46094.4 |
| pp_05407 | SAMN05216476_5816 | Not Available | Positive | 6225442 - 6226449 | Not Available |
| dna-binding protein fis | SAMN05216476_5817 | Q9HUW0 | Positive | 6226446 - 6226766 | 11736.2 |
| imp cyclohydrolase /phosphoribosylaminoimidazolecarboxamide formyltransferase | SAMN05216476_5818 | Q4KIX5 | Positive | 6226850 - 6228457 | 57550.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tomato pith necrosis | Causes | PMC12847849 |
| Pith necrosis | Causes | PMC12847849 |






