Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas mediterranea |
| Strain | 9.1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1229552 bp
Thymine Count
1232435 bp
Guanine Count
1942212 bp
Cytosine Count
1941936 bp
Genome Length
6346235 bp
Protein-coding Genes
5363 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna helicase/exodeoxyribonuclease v, alpha subunit | SAMN05216476_5755 | P04993 | Negative | 6155219 - 6157315 | 77134.0 |
| dna helicase/exodeoxyribonuclease v, beta subunit | SAMN05216476_5756 | P08394 | Negative | 6157312 - 6161001 | 137468.0 |
| dna helicase/exodeoxyribonuclease v, gamma subunit | SAMN05216476_5757 | P07648 | Negative | 6160998 - 6164450 | 129844.0 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 6164606 - 6164721 | 18.01 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | Positive | 6164891 - 6167786 | 18.01 |
| Trna-ala | Not Available | Not Available | Positive | 6168034 - 6168109 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 6168136 - 6168212 | Not Available |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | Positive | 6168276 - 6169816 | 18.01 |
| methylmalonate-semialdehyde dehydrogenase | SAMN05216476_5763 | Q9I702 | Negative | 6170449 - 6171942 | 53432.3 |
| beta-alanine--pyruvate transaminase | SAMN05216476_5764 | P28269 | Negative | 6172014 - 6173363 | 48540.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tomato pith necrosis | Causes | PMC12847849 |
| Pith necrosis | Causes | PMC12847849 |






