Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas mediterranea |
| Strain | 9.1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1229552 bp
Thymine Count
1232435 bp
Guanine Count
1942212 bp
Cytosine Count
1941936 bp
Genome Length
6346235 bp
Protein-coding Genes
5363 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, contains gh25 family domain | SAMN05216476_5552 | P44276 | Positive | 5912844 - 5913563 | 25873.2 |
| histidinol phosphate aminotransferase apoenzyme | SAMN05216476_5553 | Q3KHZ1 | Negative | 5913834 - 5914886 | 38716.3 |
| histidinol dehydrogenase | SAMN05216476_5554 | Q4KI73 | Negative | 5914888 - 5916225 | 47801.7 |
| atp phosphoribosyltransferase (homohexameric) | SAMN05216476_5555 | C3K8X5 | Negative | 5916349 - 5916984 | 23053.4 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | SAMN05216476_5556 | Q4KI75 | Negative | 5917112 - 5918377 | 44960.0 |
| acid stress-induced bola-like protein ibag/yrba, predicted regulator of iron metabolism | SAMN05216476_5557 | P45026 | Negative | 5918400 - 5918639 | 8679.31 |
| phospholipid transport system transporter-binding protein | SAMN05216476_5558 | Q9X1F5 | Negative | 5918755 - 5919072 | 11148.5 |
| phospholipid transport system substrate-binding protein | SAMN05216476_5559 | Q9Z3Z9 | Negative | 5919069 - 5919722 | 23957.6 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN05216476_5560 | P64605 | Negative | 5919734 - 5920201 | 16470.1 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN05216476_5561 | P45030 | Negative | 5920201 - 5920998 | 28364.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tomato pith necrosis | Causes | PMC12847849 |
| Pith necrosis | Causes | PMC12847849 |






