Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas mediterranea |
| Strain | 9.1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1229552 bp
Thymine Count
1232435 bp
Guanine Count
1942212 bp
Cytosine Count
1941936 bp
Genome Length
6346235 bp
Protein-coding Genes
5363 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation elongation factor ts (ef-ts) | SAMN05216476_5228 | Q4ZWS7 | Negative | 5606811 - 5607677 | 30452.7 |
| ssu ribosomal protein s2p | SAMN05216476_5229 | Q48F59 | Negative | 5607872 - 5608609 | 27075.8 |
| methionine aminopeptidase, type i | SAMN05216476_5231 | P0AE20 | Positive | 5609041 - 5609823 | 28895.9 |
| utp--glnb (protein pii) uridylyltransferase, glnd | SAMN05216476_5232 | Q3KHB4 | Positive | 5609867 - 5612569 | 103111.0 |
| succinyldiaminopimelate aminotransferase apoenzyme | SAMN05216476_5233 | Q72BI1 | Positive | 5612698 - 5613897 | 44083.7 |
| phage-related protein | SAMN05216476_5234 | P44031 | Positive | 5614195 - 5614536 | 12771.8 |
| helix-turn-helix domain-containing protein | SAMN05216476_5235 | Not Available | Positive | 5614547 - 5614849 | 10929.1 |
| hypothetical protein | SAMN05216476_5236 | Not Available | Negative | 5615078 - 5615437 | 12778.1 |
| hypothetical protein | SAMN05216476_5237 | Not Available | Negative | 5616043 - 5616777 | 26890.8 |
| hypothetical protein | SAMN05216476_5238 | Not Available | Negative | 5617343 - 5617636 | 10984.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tomato pith necrosis | Causes | PMC12847849 |
| Pith necrosis | Causes | PMC12847849 |






