Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas mediterranea |
| Strain | 9.1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1229552 bp
Thymine Count
1232435 bp
Guanine Count
1942212 bp
Cytosine Count
1941936 bp
Genome Length
6346235 bp
Protein-coding Genes
5363 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl dehydratase | SAMN05216476_5033 | C5AZ74 | Positive | 5421471 - 5421941 | 17071.7 |
| rnd family efflux transporter, mfp subunit | SAMN05216476_5034 | P76185 | Negative | 5422116 - 5422979 | 31881.4 |
| protein of unknown function | SAMN05216476_5035 | Not Available | Negative | 5422990 - 5423196 | 7449.62 |
| uncharacterized membrane protein yccc | SAMN05216476_5037 | O05543 | Negative | 5423183 - 5425183 | 71996.2 |
| conserved hypothetical protein | SAMN05216476_5038 | Not Available | Negative | 5425562 - 5426026 | 17162.1 |
| hypothetical protein | SAMN05216476_5039 | P0AD41 | Positive | 5426233 - 5426469 | 8833.85 |
| selenocysteine lyase/cysteine desulfurase | SAMN05216476_5040 | P18549 | Positive | 5426482 - 5427669 | 44553.6 |
| 2-keto-3-deoxy-phosphogluconate aldolase | SAMN05216476_5041 | P00885 | Negative | 5427766 - 5428431 | 23287.6 |
| 6-phosphogluconolactonase | SAMN05216476_5042 | Q9EV79 | Negative | 5428449 - 5429162 | 25320.6 |
| glucose-6-phosphate 1-dehydrogenase | SAMN05216476_5043 | O68282 | Negative | 5429149 - 5430618 | 55056.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tomato pith necrosis | Causes | PMC12847849 |
| Pith necrosis | Causes | PMC12847849 |






