Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas mediterranea |
| Strain | 9.1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1229552 bp
Thymine Count
1232435 bp
Guanine Count
1942212 bp
Cytosine Count
1941936 bp
Genome Length
6346235 bp
Protein-coding Genes
5363 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-methionine transport system substrate-binding protein | SAMN05216476_0295 | Q8X8V9 | Positive | 325995 - 326804 | 29151.0 |
| d-methionine transport system atp-binding protein | SAMN05216476_0296 | Q3KJS6 | Positive | 326807 - 327925 | 41015.8 |
| d-methionine transport system permease protein | SAMN05216476_0297 | Q9KTJ6 | Positive | 327915 - 328559 | 22962.9 |
| methyltransferase domain-containing protein | SAMN05216476_0298 | Q6BRB7 | Positive | 328617 - 329246 | 23621.8 |
| cystine transport system substrate-binding protein | SAMN05216476_0299 | P0AEN0 | Negative | 329332 - 329910 | 20964.0 |
| protein of unknown function | SAMN05216476_0300 | Not Available | Positive | 330044 - 330466 | 14658.8 |
| d-3-phosphoglycerate dehydrogenase | SAMN05216476_0301 | P0A9T2 | Negative | 330663 - 331892 | 44309.4 |
| glycolate oxidase, subunit glcd | SAMN05216476_0302 | A4VGK4 | Positive | 332094 - 333488 | 51153.1 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05216476_0303 | P76004 | Positive | 333529 - 334194 | 23613.5 |
| uncharacterized protein yjik | SAMN05216476_0304 | Q8XB94 | Positive | 334427 - 335359 | 34778.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tomato pith necrosis | Causes | PMC12847849 |
| Pith necrosis | Causes | PMC12847849 |






