Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas mediterranea |
| Strain | 9.1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1229552 bp
Thymine Count
1232435 bp
Guanine Count
1942212 bp
Cytosine Count
1941936 bp
Genome Length
6346235 bp
Protein-coding Genes
5363 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | SAMN05216476_4890 | Not Available | Negative | 5294977 - 5295618 | 23876.8 |
| lipid a ethanolaminephosphotransferase | SAMN05216476_4891 | P30845 | Negative | 5295688 - 5297337 | 61174.1 |
| glutamine synthetase | SAMN05216476_4892 | P78061 | Negative | 5297504 - 5298886 | 50814.7 |
| hypothetical protein | SAMN05216476_4893 | Not Available | Negative | 5298968 - 5299141 | 6157.43 |
| regulatory helix-turn-helix protein, lysr family | SAMN05216476_4894 | P77746 | Positive | 5299361 - 5299732 | 13836.6 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | SAMN05216476_4895 | Q05354 | Negative | 5299736 - 5300098 | 13141.9 |
| transcriptional regulator, lysr family | SAMN05216476_4896 | Q9EXL7 | Negative | 5300405 - 5301334 | 34278.4 |
| uncharacterized conserved protein yegp, upf0339 family | SAMN05216476_4897 | Q7DDI1 | Positive | 5301501 - 5301692 | 7218.57 |
| mannose-6-phosphate isomerase, cupin superfamily | SAMN05216476_4898 | P96597 | Positive | 5301795 - 5302163 | 13881.4 |
| phytanoyl-coa dioxygenase (phyh) | SAMN05216476_4899 | P9WI88 | Negative | 5302182 - 5302952 | 28610.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tomato pith necrosis | Causes | PMC12847849 |
| Pith necrosis | Causes | PMC12847849 |






