Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas mediterranea |
| Strain | 9.1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1229552 bp
Thymine Count
1232435 bp
Guanine Count
1942212 bp
Cytosine Count
1941936 bp
Genome Length
6346235 bp
Protein-coding Genes
5363 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216476_4869 | Not Available | Positive | 5277635 - 5278813 | 45633.5 |
| biotin-dependent carboxylase uncharacterized domain-containing protein | SAMN05216476_4870 | P44298 | Negative | 5278915 - 5279835 | 32453.4 |
| sensor histidine kinase inhibitor, kipi family | SAMN05216476_4871 | P60495 | Negative | 5279832 - 5280536 | 25902.1 |
| upf0271 protein | SAMN05216476_4872 | Q3KGF8 | Negative | 5280533 - 5281285 | 26823.0 |
| predicted arabinose efflux permease, mfs family | SAMN05216476_4873 | O51798 | Negative | 5281344 - 5282630 | 46495.5 |
| protein of unknown function | SAMN05216476_4874 | Not Available | Negative | 5282947 - 5283489 | 20358.8 |
| glutamine amidotransferase | SAMN05216476_4875 | Q47147 | Negative | 5283502 - 5284278 | 28895.3 |
| hypothetical protein | SAMN05216476_4876 | Not Available | Negative | 5284311 - 5284811 | 18672.9 |
| oligopeptidase b | SAMN05216476_4877 | O07834 | Positive | 5284902 - 5286956 | 76426.7 |
| cyclic nucleotide-binding domain-containing protein | SAMN05216476_4879 | Q5SID7 | Positive | 5287163 - 5287636 | 16822.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tomato pith necrosis | Causes | PMC12847849 |
| Pith necrosis | Causes | PMC12847849 |






