Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas mediterranea |
| Strain | 9.1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1229552 bp
Thymine Count
1232435 bp
Guanine Count
1942212 bp
Cytosine Count
1941936 bp
Genome Length
6346235 bp
Protein-coding Genes
5363 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05216476_0284 | Q08632 | Positive | 313720 - 314460 | 26160.3 |
| choline/glycine/proline betaine transport protein | SAMN05216476_0285 | Q6FDF5 | Negative | 314472 - 316472 | 73326.6 |
| d-cysteine desulfhydrase | SAMN05216476_0286 | A8GFZ8 | Positive | 316896 - 317888 | 35262.5 |
| cystine transport system substrate-binding protein | SAMN05216476_0288 | P0AEN0 | Positive | 318194 - 318994 | 28883.7 |
| cystine transport system permease protein | SAMN05216476_0289 | P0AFT3 | Positive | 318994 - 319659 | 24556.6 |
| l-cystine abc transporter atp-binding protein /diaminopimelate abc transporter atp-binding protein | SAMN05216476_0290 | P37774 | Positive | 319663 - 320424 | 27851.9 |
| hypothetical protein | SAMN05216476_0291 | Not Available | Positive | 320885 - 321655 | 27848.7 |
| sulfur acquisition oxidoreductase, sfnb family | SAMN05216476_0292 | A0A0C6DRW4 | Positive | 322003 - 323244 | 44938.6 |
| sulfur acquisition oxidoreductase, sfnb family | SAMN05216476_0293 | P54998 | Positive | 323268 - 324461 | 43128.4 |
| fmn-dependent oxidoreductase, nitrilotriacetate monooxygenase family | SAMN05216476_0294 | A4IU28 | Positive | 324461 - 325819 | 51068.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tomato pith necrosis | Causes | PMC12847849 |
| Pith necrosis | Causes | PMC12847849 |






