Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas mediterranea |
| Strain | 9.1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1229552 bp
Thymine Count
1232435 bp
Guanine Count
1942212 bp
Cytosine Count
1941936 bp
Genome Length
6346235 bp
Protein-coding Genes
5363 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, response regulator flrc | SAMN05216476_4766 | Q9I4N3 | Negative | 5143828 - 5145207 | 50046.7 |
| two-component system, sensor histidine kinase flrb | SAMN05216476_4767 | Q9I4N4 | Negative | 5145213 - 5146427 | 44270.3 |
| sigma-54 specific transcriptional regulator, flagellar regulatory protein a | SAMN05216476_4768 | G3XCV0 | Negative | 5146655 - 5148130 | 55499.8 |
| hypothetical protein | SAMN05216476_4769 | Not Available | Negative | 5148300 - 5148596 | 10994.1 |
| flagellar protein flis | SAMN05216476_4770 | Q9I4N6 | Negative | 5148608 - 5149003 | 14289.5 |
| flagellar hook-associated protein 2 | SAMN05216476_4771 | O33421 | Negative | 5149134 - 5150561 | 47992.6 |
| flagellar protein flag | SAMN05216476_4772 | Q56573 | Negative | 5150644 - 5151009 | 12965.6 |
| flagellin | SAMN05216476_4773 | P21184 | Negative | 5151082 - 5151930 | 29549.4 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN05216476_4774 | Q81GM0 | Negative | 5152271 - 5153197 | 32993.2 |
| glycosyltransferase domain-containing protein | SAMN05216476_4775 | P55465 | Negative | 5153531 - 5156437 | 106826.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tomato pith necrosis | Causes | PMC12847849 |
| Pith necrosis | Causes | PMC12847849 |






