Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas mediterranea |
| Strain | 9.1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1229552 bp
Thymine Count
1232435 bp
Guanine Count
1942212 bp
Cytosine Count
1941936 bp
Genome Length
6346235 bp
Protein-coding Genes
5363 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05216476_4714 | Not Available | Positive | 5097275 - 5097427 | 5276.12 |
| phosphoglycerol transferase mdob | SAMN05216476_4715 | P44135 | Negative | 5097481 - 5099577 | 77723.2 |
| spermidine synthase | SAMN05216476_4716 | Q884N3 | Negative | 5099975 - 5100850 | 32681.1 |
| hypothetical protein | SAMN05216476_4717 | Not Available | Negative | 5101055 - 5101462 | 14490.2 |
| cytochrome c-type biogenesis protein ccmh | SAMN05216476_4718 | Q9I3M9 | Negative | 5101477 - 5102679 | 43135.9 |
| cytochrome c-type biogenesis protein ccmh | SAMN05216476_4719 | P52226 | Negative | 5102672 - 5103145 | 17855.6 |
| cytochrome c biogenesis protein ccmg, thiol:disulfide interchange protein dsbe | SAMN05216476_4720 | P52237 | Negative | 5103142 - 5103678 | 19991.5 |
| cytochrome c-type biogenesis protein ccmf | SAMN05216476_4721 | P52225 | Negative | 5103675 - 5105663 | 72228.5 |
| cytochrome c-type biogenesis protein ccme | SAMN05216476_4722 | Q3KC07 | Negative | 5105667 - 5106122 | 16083.6 |
| heme exporter protein d | SAMN05216476_4723 | P0C1F7 | Negative | 5106119 - 5106295 | 6591.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tomato pith necrosis | Causes | PMC12847849 |
| Pith necrosis | Causes | PMC12847849 |






