Pseudomonas mediterranea 9.1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas mediterranea 9.1 is characterized by its single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. This bacterium is cataloged under the accession number LT629790.1, which provides a reference point for researchers investigating its genetic makeup and potential applications. One notable aspect of Pseudomonas species is their metabolic versatility, which allows them to thrive in diverse ecological niches. While specific metabolic pathways for Pseudomonas mediterranea 9.1 are not detailed here, the genus Pseudomonas is known for its ability to degrade a wide range of organic compounds, suggesting that Pseudomonas mediterranea 9.1 may also play a role in bioremediation or nutrient cycling in its habitat. The single replicon may facilitate rapid replication and adaptability, which is advantageous in fluctuating environments where resource availability can change. This trait could enhance the bacterium's survival and competitive capabilities in natural ecosystems. Overall, the study of Pseudomonas mediterranea 9.1, particularly through its genetic accession LT629790.1, can provide insights into the ecological roles of Pseudomonas species and their potential utility in environmental biotechnology, especially in processes related to the degradation of pollutants and organic matter.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas mediterranea
Strain9.1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas mediterranea 9.1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatSoil
Biotic relationshipNot Available
Host(s)Solanum lycopersicum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas mediterranea 9.1, Chromosome

Gene Summary

Adenine Count

1229552 bp

Thymine Count

1232435 bp

Guanine Count

1942212 bp

Cytosine Count

1941936 bp

Genome Length

6346235 bp

Protein-coding Genes

5363 genes

Non-Coding Genes

241 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diguanylate cyclase (ggdef) domain-containing proteinSAMN05216476_4693Q9HT84Positive5072785 - 507371134723.7
pyrroloquinoline quinone (pqq) biosynthesis protein cSAMN05216476_4695Not AvailableNegative5073986 - 507478930588.4
pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing proteinSAMN05216476_4696Q8EJM6Negative5074837 - 507729690741.3
atp-binding cassette, subfamily cSAMN05216476_4697Q62IG3Negative5077487 - 507931366403.1
putative protein-disulfide isomeraseSAMN05216476_4698Q9K8Z7Negative5079306 - 507994122948.5
upf0176 proteinSAMN05216476_4699Q4K8L6Negative5079945 - 508088635522.1
transcriptional regulator, bola protein familySAMN05216476_4700Q9KPS0Negative5081155 - 508145411089.3
hypothetical proteinSAMN05216476_4701Not AvailableNegative5081467 - 508199418992.1
fumarase, class iiSAMN05216476_4702Q88M20Positive5082187 - 508358149255.0
eama domain-containing membrane protein rardSAMN05216476_4703P0AA74Negative5083737 - 508469935065.3

Displaying genes 4541 – 4550 of 5604 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Tomato pith necrosisCausesPMC12847849
Pith necrosisCausesPMC12847849

Displaying health effects 1 – 2 of 2 in total