Pseudomonas mediterranea 9.1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas mediterranea 9.1 is characterized by its single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. This bacterium is cataloged under the accession number LT629790.1, which provides a reference point for researchers investigating its genetic makeup and potential applications. One notable aspect of Pseudomonas species is their metabolic versatility, which allows them to thrive in diverse ecological niches. While specific metabolic pathways for Pseudomonas mediterranea 9.1 are not detailed here, the genus Pseudomonas is known for its ability to degrade a wide range of organic compounds, suggesting that Pseudomonas mediterranea 9.1 may also play a role in bioremediation or nutrient cycling in its habitat. The single replicon may facilitate rapid replication and adaptability, which is advantageous in fluctuating environments where resource availability can change. This trait could enhance the bacterium's survival and competitive capabilities in natural ecosystems. Overall, the study of Pseudomonas mediterranea 9.1, particularly through its genetic accession LT629790.1, can provide insights into the ecological roles of Pseudomonas species and their potential utility in environmental biotechnology, especially in processes related to the degradation of pollutants and organic matter.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas mediterranea
Strain9.1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas mediterranea 9.1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatSoil
Biotic relationshipNot Available
Host(s)Solanum lycopersicum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas mediterranea 9.1, Chromosome

Gene Summary

Adenine Count

1229552 bp

Thymine Count

1232435 bp

Guanine Count

1942212 bp

Cytosine Count

1941936 bp

Genome Length

6346235 bp

Protein-coding Genes

5363 genes

Non-Coding Genes

241 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
serine/threonine protein phosphatase prpcSAMN05216476_4546O34507Positive4923467 - 492513761643.9
assimilatory nitrite reductase (nad(p)h) large subunit precursorSAMN05216476_4547P42435Positive4925591 - 492804489646.9
assimilatory nitrite reductase (nad(p)h) small subunitSAMN05216476_4548P42436Positive4928041 - 492835811461.6
assimilatory nitrate reductase catalytic subunitSAMN05216476_4549Q06457Positive4928358 - 493107598758.0
uroporphyrinogen-iii c-methyltransferaseSAMN05216476_4550P37725Positive4931086 - 493184126493.1
ompa-ompf porin, oop familySAMN05216476_4551P22263Negative4932135 - 493317236674.1
rna polymerase sigma-70 factor, ecf subfamilySAMN05216476_4552O07627Negative4933281 - 493387123229.9
mechanosensitive ion channelSAMN05216476_4553P37874Negative4933963 - 493478729059.7
hypothetical proteinSAMN05216476_4554Not AvailableNegative4934790 - 49350358831.58
zinc transporterSAMN05216476_4555Q6D5P8Negative4935098 - 493609338038.1

Displaying genes 4401 – 4410 of 5604 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Tomato pith necrosisCausesPMC12847849
Pith necrosisCausesPMC12847849

Displaying health effects 1 – 2 of 2 in total