Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas mediterranea |
| Strain | 9.1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1229552 bp
Thymine Count
1232435 bp
Guanine Count
1942212 bp
Cytosine Count
1941936 bp
Genome Length
6346235 bp
Protein-coding Genes
5363 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05216476_0233 | P55587 | Negative | 262555 - 262965 | 15311.4 |
| hypothetical protein | SAMN05216476_0234 | Not Available | Negative | 263310 - 263648 | 13282.2 |
| dna-binding transcriptional regulator, lysr family | SAMN05216476_0235 | P0A2Q5 | Positive | 264223 - 265149 | 34605.5 |
| branched-chain amino acid transport protein | SAMN05216476_0236 | Not Available | Negative | 265066 - 265383 | 11648.6 |
| 4-azaleucine resistance probable transporter azlc | SAMN05216476_0237 | O25889 | Negative | 265362 - 266075 | 25216.4 |
| ribosomal protein s18 acetylase rimi | SAMN05216476_0238 | Q57LQ8 | Negative | 266072 - 266509 | 16326.7 |
| hypothetical protein | SAMN05216476_0239 | E2GIN1 | Negative | 266523 - 267269 | 29110.2 |
| outer membrane porin, oprd family | SAMN05216476_0240 | P32722 | Negative | 267505 - 268791 | 46634.0 |
| putative protein-disulfide isomerase | SAMN05216476_0241 | O31606 | Negative | 269031 - 269705 | 24238.1 |
| hypothetical protein | SAMN05216476_0242 | Not Available | Negative | 269992 - 270192 | 7587.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tomato pith necrosis | Causes | PMC12847849 |
| Pith necrosis | Causes | PMC12847849 |






