Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas mediterranea |
| Strain | 9.1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1229552 bp
Thymine Count
1232435 bp
Guanine Count
1942212 bp
Cytosine Count
1941936 bp
Genome Length
6346235 bp
Protein-coding Genes
5363 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | SAMN05216476_0222 | Q6AYG0 | Positive | 248037 - 249290 | 46987.3 |
| Trna-thr | Not Available | Not Available | Positive | 249707 - 249779 | Not Available |
| integrase | SAMN05216476_0224 | P39347 | Positive | 249955 - 251277 | 49784.2 |
| integrase | SAMN05216476_0226 | Not Available | Positive | 252188 - 253165 | 36524.5 |
| hypothetical protein | SAMN05216476_0227 | Not Available | Positive | 253948 - 254619 | 24931.0 |
| reverse transcriptase (rna-dependent dna polymerase) | SAMN05216476_0228 | Not Available | Positive | 255009 - 256850 | 71011.7 |
| dna polymerase family a | SAMN05216476_0229 | P43741 | Positive | 256843 - 258390 | 58998.5 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05216476_0230 | O52866 | Negative | 258812 - 259750 | 35049.9 |
| methyl-accepting chemotaxis protein | SAMN05216476_0231 | Q9I3S1 | Positive | 260156 - 261763 | 57600.4 |
| res domain-containing protein | SAMN05216476_0232 | P55588 | Negative | 261878 - 262555 | 25274.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tomato pith necrosis | Causes | PMC12847849 |
| Pith necrosis | Causes | PMC12847849 |






