Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas mediterranea |
| Strain | 9.1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1229552 bp
Thymine Count
1232435 bp
Guanine Count
1942212 bp
Cytosine Count
1941936 bp
Genome Length
6346235 bp
Protein-coding Genes
5363 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine ammonia-lyase | SAMN05216476_0159 | Q67JH4 | Negative | 186185 - 187708 | 53928.2 |
| glycine betaine/proline transport system atp-binding protein | SAMN05216476_0160 | P46920 | Negative | 187852 - 188682 | 30714.4 |
| glycine betaine/proline transport system permease protein | SAMN05216476_0161 | P14176 | Negative | 188679 - 189530 | 30686.8 |
| glycine betaine/proline transport system substrate-binding protein | SAMN05216476_0162 | Q8ZML1 | Negative | 189602 - 190570 | 35207.3 |
| nucleobase:cation symporter-1, ncs1 family | SAMN05216476_0163 | P94369 | Negative | 190640 - 192106 | 51989.2 |
| urocanate hydratase | SAMN05216476_0165 | C3K803 | Negative | 192258 - 193946 | 61414.1 |
| hypothetical protein | SAMN05216476_0166 | P24696 | Negative | 194396 - 194965 | 20327.0 |
| transcriptional regulator, gntr family /transcriptional regulator, histidine utilization repressor, gntr family | SAMN05216476_0167 | P22773 | Negative | 194962 - 195711 | 27855.5 |
| formimidoylglutamate deiminase | SAMN05216476_0168 | Q9HU77 | Positive | 195976 - 197340 | 49684.8 |
| apolipoprotein d and lipocalin family protein | SAMN05216476_0169 | Q9FGT8 | Negative | 197454 - 198023 | 21563.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tomato pith necrosis | Causes | PMC12847849 |
| Pith necrosis | Causes | PMC12847849 |






