Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas mediterranea |
| Strain | 9.1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1229552 bp
Thymine Count
1232435 bp
Guanine Count
1942212 bp
Cytosine Count
1941936 bp
Genome Length
6346235 bp
Protein-coding Genes
5363 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative polyhydroxyalkanoic acid system protein | SAMN05216476_0138 | Not Available | Negative | 164312 - 164587 | 9802.93 |
| demethylmenaquinone methyltransferase /2-octaprenyl-6-methoxy-1,4-benzoquinone methylase | SAMN05216476_0139 | Q3KJC5 | Positive | 164728 - 165498 | 28399.3 |
| ubiquinone biosynthesis protein ubij | SAMN05216476_0140 | Q9L6M5 | Positive | 165498 - 166115 | 22937.6 |
| 2-octaprenylphenol hydroxylase | SAMN05216476_0141 | Q3KJC7 | Positive | 166119 - 167723 | 61393.1 |
| phosphoribosyl-amp cyclohydrolase | SAMN05216476_0142 | Q3KJC8 | Positive | 167805 - 168203 | 15259.1 |
| phosphoribosyl-atp pyrophosphatase | SAMN05216476_0143 | Q3KJC9 | Positive | 168196 - 168528 | 11929.1 |
| sec-independent protein translocase protein tata | SAMN05216476_0144 | Q3KJD0 | Positive | 168553 - 168825 | 9799.79 |
| sec-independent protein translocase protein tatb | SAMN05216476_0145 | Q4KJL8 | Positive | 168836 - 169252 | 14834.8 |
| sec-independent protein translocase protein tatc | SAMN05216476_0146 | P54085 | Positive | 169249 - 170043 | 29407.8 |
| rna methyltransferase, rsme family | SAMN05216476_0147 | O83075 | Positive | 170040 - 170747 | 26068.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tomato pith necrosis | Causes | PMC12847849 |
| Pith necrosis | Causes | PMC12847849 |






