Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas mediterranea |
| Strain | 9.1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1229552 bp
Thymine Count
1232435 bp
Guanine Count
1942212 bp
Cytosine Count
1941936 bp
Genome Length
6346235 bp
Protein-coding Genes
5363 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (adenine2030-n6)-methyltransferase | SAMN05216476_0053 | P37634 | Negative | 65539 - 66378 | 31874.6 |
| protein of unknown function | SAMN05216476_0054 | Not Available | Negative | 66463 - 67194 | 27044.3 |
| type vi secretion system secreted protein vgrg | SAMN05216476_0055 | Q9HYC3 | Negative | 67191 - 69248 | 76516.7 |
| predicted small integral membrane protein | SAMN05216476_0056 | Not Available | Positive | 69513 - 70007 | 18720.7 |
| sodium/proline symporter | SAMN05216476_0057 | P07117 | Negative | 70154 - 71638 | 52971.5 |
| l-proline dehydrogenase /delta-1-pyrroline-5-carboxylate dehydrogenase | SAMN05216476_0058 | O52485 | Positive | 72096 - 76049 | 142991.0 |
| butyryl-coa dehydrogenase | SAMN05216476_0060 | Q5LLW7 | Positive | 76292 - 78094 | 66514.2 |
| methyl-accepting chemotaxis protein | SAMN05216476_0061 | Q88R14 | Negative | 78359 - 80296 | 69169.8 |
| cell division protein zapa, inhibits gtpase activity of ftsz | SAMN05216476_0062 | Not Available | Negative | 80399 - 80701 | 10943.3 |
| hypothetical protein | SAMN05216476_0063 | Not Available | Negative | 80698 - 80928 | 8343.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tomato pith necrosis | Causes | PMC12847849 |
| Pith necrosis | Causes | PMC12847849 |






