Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas mediterranea |
| Strain | 9.1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1229552 bp
Thymine Count
1232435 bp
Guanine Count
1942212 bp
Cytosine Count
1941936 bp
Genome Length
6346235 bp
Protein-coding Genes
5363 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-1,3-rhamnosyltransferase | SAMN05216476_0033 | P22639 | Negative | 35904 - 36788 | 33793.7 |
| glycosyltransferase family 4 | SAMN05216476_0034 | Q9R9N2 | Negative | 36785 - 37939 | 43139.5 |
| hypothetical protein | SAMN05216476_0035 | Not Available | Negative | 37936 - 38820 | 34949.6 |
| n-acetylglucosaminyl deacetylase, lmbe family | SAMN05216476_0036 | B1MLH7 | Negative | 38867 - 40300 | 53779.4 |
| acetyltransferase involved in cellulose biosynthesis, celd/bcsl family | SAMN05216476_0037 | Not Available | Negative | 40309 - 41205 | 33596.1 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05216476_0038 | Q9R9N1 | Negative | 41205 - 42335 | 41514.3 |
| carbamoyltransferase | SAMN05216476_0039 | P74178 | Negative | 42319 - 44076 | 65466.6 |
| lipopolysaccharide kinase (kdo/waap) family protein | SAMN05216476_0040 | Not Available | Negative | 44355 - 45806 | 54156.5 |
| lipopolysaccharide kinase (kdo/waap) family protein | SAMN05216476_0041 | P27294 | Negative | 45806 - 46558 | 28862.4 |
| lipopolysaccharide kinase (kdo/waap) family protein | SAMN05216476_0042 | Q9KVB9 | Negative | 46555 - 47289 | 28755.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tomato pith necrosis | Causes | PMC12847849 |
| Pith necrosis | Causes | PMC12847849 |






