Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas mediterranea |
| Strain | 9.1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1229552 bp
Thymine Count
1232435 bp
Guanine Count
1942212 bp
Cytosine Count
1941936 bp
Genome Length
6346235 bp
Protein-coding Genes
5363 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Nad-dependent dna ligase subunit a | SAMN05216476_5270 | Not Available | Negative | 5640608 - 5640802 | 7468.93 |
| Hypothetical protein | SAMN05216476_5271 | Not Available | Negative | 5640804 - 5641118 | 11449.9 |
| hypothetical protein | SAMN05216476_5272 | Not Available | Negative | 5641115 - 5641312 | 7375.1 |
| Integrase | SAMN05216476_5273 | P06155 | Negative | 5641309 - 5642580 | 47696.6 |
| Rus-a like endodeoxyribonuclease | SAMN05216476_5274 | Q9PCT9 | Negative | 5642592 - 5642969 | 14092.0 |
| Hypothetical protein | SAMN05216476_5275 | P68662 | Negative | 5642966 - 5643268 | 10674.9 |
| hypothetical protein | SAMN05216476_5276 | Not Available | Negative | 5643259 - 5643468 | 7726.33 |
| Putative replication protein p | SAMN05216476_5277 | P14814 | Negative | 5643461 - 5644222 | 27751.6 |
| Helix-turn-helix dna binding domain protein | SAMN05216476_5278 | Not Available | Negative | 5644222 - 5644998 | 27824.6 |
| Dna-binding protein | SAMN05216476_5279 | P19655 | Negative | 5645010 - 5645750 | 26982.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tomato pith necrosis | Causes | PMC12847849 |
| Pith necrosis | Causes | PMC12847849 |






