Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas mediterranea |
| Strain | 9.1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1229552 bp
Thymine Count
1232435 bp
Guanine Count
1942212 bp
Cytosine Count
1941936 bp
Genome Length
6346235 bp
Protein-coding Genes
5363 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative baseplate assembly protein v | SAMN05216476_5186 | P31340 | Negative | 5565485 - 5566096 | 21553.6 |
| Putative phage-related protein | SAMN05216476_5187 | Not Available | Negative | 5566100 - 5566612 | 18597.9 |
| bacteriophage holin hol, superfamily iii | SAMN05216476_5188 | Not Available | Negative | 5566650 - 5567000 | 12459.5 |
| hypothetical protein | SAMN05216476_5189 | Not Available | Negative | 5567098 - 5567742 | 22816.0 |
| Com translational regulator | SAMN05216476_5190 | P71390 | Negative | 5567764 - 5567946 | 6769.4 |
| Putative cro/ci transcriptional regulator | SAMN05216476_5191 | Q06553 | Negative | 5568415 - 5569149 | 27464.5 |
| hypothetical protein | SAMN05216476_5193 | Not Available | Positive | 5569667 - 5570026 | 12957.3 |
| Putative mismatch repair protein | SAMN05216476_5194 | Q3KH79 | Positive | 5570302 - 5572929 | 97180.2 |
| Attl | Not Available | Not Available | Positive | 5615048 - 5615059 | Not Available |
| Attl | Not Available | Not Available | Positive | 5615864 - 5615876 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tomato pith necrosis | Causes | PMC12847849 |
| Pith necrosis | Causes | PMC12847849 |






