Dickeya dadantii subsp. dieffenbachiae

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Dickeya

Description

Dickeya dadantii subsp. dieffenbachiae is a rod-shaped bacterium known for its pathogenicity, particularly in plant systems. It possesses flagella, which contribute to its motility and ability to colonize host tissues. The genetic organization of this subspecies is notable, with a total of 14 replicons identified, indicating a complex genomic structure that may facilitate adaptability and survival in varied environments. This subspecies is associated with significant plant diseases, highlighting its ecological impact and importance in agriculture. The accessions associated with Dickeya dadantii subsp. dieffenbachiae include CM001978.1, AOOG01000072.1, AOOG01000073.1, AOOG01000074.1, AOOG01000075.1, AOOG01000076.1, AOOG01000077.1, AOOG01000078.1, AOOG01000079.1, AOOG01000080.1, AOOG01000081.1, AOOG01000082.1, AOOG01000083.1, and AOOG01000084.1. These accessions provide valuable genetic information for understanding the subspecies' characteristics and potential resistance mechanisms against it. The presence of flagella suggests that Dickeya dadantii subsp. dieffenbachiae can actively move towards nutrient sources or host plants, which may enhance its pathogenicity. Its ecological role as a plant pathogen underscores the need for ongoing research to develop effective management strategies in agricultural systems to mitigate its impact on crop health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusDickeya
SpeciesDickeya dadantii
Strainsubsp. dieffenbachiae

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

338 bp

Thymine Count

283 bp

Guanine Count

299 bp

Cytosine Count

283 bp

Genome Length

1203 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

14

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Transposase-Not AvailableNegative175903 - 1759923458.21
Tail fiber protein-P26700Positive176679 - 17786341919.9
Tail fiber assembly protein-P76155Positive177893 - 17848322221.1
Phage tail collar domain protein-P26700Positive178788 - 18021248311.0
Tail fiber assembly protein-P09154Positive180209 - 18060414862.7
Nudix hydrolase-Q75UV1Negative180601 - 18106517683.7
Helix-turn-helix dna binding domain protein-Not AvailablePositive181268 - 18173817973.8
AttlNot AvailableNot AvailablePositive861130 - 861142Not Available
Cp4-57 prophage-P32053Negative863560 - 86475044588.4
AttlNot AvailableNot AvailablePositive864950 - 864966Not Available

Displaying genes 1 – 10 of 4249 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.