Dickeya chrysanthemi EC17

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Dickeya

Description

Dickeya chrysanthemi EC17 is a Gram-negative bacterium characterized by its rod-shaped morphology and presence of flagella, which allows for motility. This organism is aerobic, necessitating oxygen for its metabolic processes. Genetic analysis reveals that D. chrysanthemi EC17 possesses a significant genetic complexity with a total of 21 replicons identified, indicating a diverse genomic architecture that may contribute to its adaptability and survival in various environments. The strain is documented in multiple genomic accessions, including CM001974.1 and several others ranging from AOOA01000058.1 to AOOA01000077.1. These accessions provide a rich resource for studying the genetic makeup and potential pathogenicity of D. chrysanthemi EC17, which is known for its role in plant diseases, particularly in chrysanthemums. The ecological implications of this bacterium are notable, as its aerobic nature suggests a preference for environments rich in oxygen, such as soil and water systems where it may interact with plant roots. Its motility, facilitated by flagella, could enhance its ability to colonize plant surfaces and establish infections, impacting agricultural practices and crop health. Understanding the traits of D. chrysanthemi EC17 is essential for developing strategies to manage its effects on ornamental and agricultural plants, highlighting the importance of microbiological research in addressing plant disease challenges.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusDickeya
SpeciesDickeya chrysanthemi
StrainEC17

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Dickeya chrysanthemi EC17
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

188 bp

Thymine Count

164 bp

Guanine Count

92 bp

Cytosine Count

93 bp

Genome Length

537 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

21

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive2392615 - 2392626Not Available
Tail fiber assembly protein-P40784Negative2396286 - 239676517663.6
Tail fiber repeat family protein-P26700Negative2396777 - 239776334186.3
Gp25, tail fiber-Not AvailableNegative2397751 - 239834121931.9
Baseplate protein-P51767Negative2398334 - 239944638960.3
Putative baseplate assembly protein with lysozyme-P51768Negative2399437 - 239979013270.8
Putative baseplate protein-P31340Negative2399836 - 240042020617.1
Tail protein-P21679Negative2400417 - 240159242978.1
Gp20, phage tail protein x-Not AvailableNegative2401580 - 24017927693.16
Tail terminator-Not AvailableNegative2401796 - 240268331319.5

Displaying genes 1 – 10 of 4151 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.