Mucilaginibacter ginsenosidivorax KHI28

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Mucilaginibacter

Description

Mucilaginibacter ginsenosidivorax KHI28 is a Gram-negative, rod-shaped bacterium. This species is characterized by having a single replicon, which indicates a streamlined genomic structure that may influence its metabolic capabilities and adaptability. The unique accession number for this strain is CP042437.1, which serves as a key identifier in genomic databases. Mucilaginibacter ginsenosidivorax KHI28 is notable for its association with ginsenosides, which are bioactive compounds found in ginseng. The ability of this bacterium to metabolize such compounds may have implications for its ecological role in the soil microbiome, particularly in environments where ginseng is cultivated. By breaking down ginsenosides, Mucilaginibacter ginsenosidivorax KHI28 may contribute to nutrient cycling and affect the availability of these compounds to plants and other microorganisms. Understanding the traits of Mucilaginibacter ginsenosidivorax KHI28 can provide insights into its potential applications in agriculture and biotechnology, especially in enhancing ginseng cultivation and promoting soil health. The bacterium’s metabolic interactions within its ecosystem could also shed light on the broader dynamics of microbial communities associated with medicinal plants.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusMucilaginibacter
SpeciesMucilaginibacter ginsenosidivorax
StrainKHI28

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mucilaginibacter ginsenosidivorax KHI28, Complete Genome

Gene Summary

Adenine Count

2223887 bp

Thymine Count

2222910 bp

Guanine Count

1681493 bp

Cytosine Count

1683123 bp

Genome Length

7811413 bp

Protein-coding Genes

6323 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf1016 domain-containing proteinFSB76_18005P45423Negative4293988 - 429503440798.1
fecr family proteinFSB76_18010Not AvailablePositive4295188 - 429628240931.2
tonb-dependent receptorFSB76_18015T2KPJ3Positive4296440 - 4299781120931.0
ragb/susd family nutrient uptake outer membrane proteinFSB76_18020T2KNB8Positive4299802 - 430136158050.9
alpha-n-arabinofuranosidaseFSB76_18025B0XQB2Positive4301490 - 430357776733.8
family 43 glycosylhydrolaseFSB76_18030A5IKD4Positive4303579 - 430506654194.6
alpha-l-arabinofuranosidaseFSB76_18035P82593Positive4305407 - 430734172082.2
arabinan endo-1,5-alpha-l-arabinosidaseFSB76_18040P95470Positive4307672 - 430867937312.5
family 43 glycosylhydrolaseFSB76_18045Q45071Positive4308882 - 430986536889.5
type ii toxin-antitoxin system yafq family toxinFSB76_18050Q47149Negative4309871 - 43101139269.31

Displaying genes 3601 – 3610 of 6034 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.