Mucilaginibacter ginsenosidivorax KHI28

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Mucilaginibacter

Description

Mucilaginibacter ginsenosidivorax KHI28 is a Gram-negative, rod-shaped bacterium. This species is characterized by having a single replicon, which indicates a streamlined genomic structure that may influence its metabolic capabilities and adaptability. The unique accession number for this strain is CP042437.1, which serves as a key identifier in genomic databases. Mucilaginibacter ginsenosidivorax KHI28 is notable for its association with ginsenosides, which are bioactive compounds found in ginseng. The ability of this bacterium to metabolize such compounds may have implications for its ecological role in the soil microbiome, particularly in environments where ginseng is cultivated. By breaking down ginsenosides, Mucilaginibacter ginsenosidivorax KHI28 may contribute to nutrient cycling and affect the availability of these compounds to plants and other microorganisms. Understanding the traits of Mucilaginibacter ginsenosidivorax KHI28 can provide insights into its potential applications in agriculture and biotechnology, especially in enhancing ginseng cultivation and promoting soil health. The bacterium’s metabolic interactions within its ecosystem could also shed light on the broader dynamics of microbial communities associated with medicinal plants.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusMucilaginibacter
SpeciesMucilaginibacter ginsenosidivorax
StrainKHI28

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mucilaginibacter ginsenosidivorax KHI28, Complete Genome

Gene Summary

Adenine Count

2223887 bp

Thymine Count

2222910 bp

Guanine Count

1681493 bp

Cytosine Count

1683123 bp

Genome Length

7811413 bp

Protein-coding Genes

6323 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3050 domain-containing proteinFSB76_06205Not AvailablePositive1510759 - 151155630148.0
4-amino-4-deoxychorismate lyaseFSB76_06210Q58414Negative1511693 - 151252931798.6
rlua family pseudouridine synthaseFSB76_06215O50310Negative1512711 - 151376640241.2
1-aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydraseFSB76_06220Q9WY68Positive1513842 - 151472932741.3
nuclear transport factor 2 family proteinFSB76_06225Not AvailableNegative1515014 - 151546916073.6
duf4350 domain-containing proteinFSB76_06230Not AvailableNegative1515499 - 151624827564.8
laci family transcriptional regulatorFSB76_06235P44329Negative1516443 - 151748338304.0
sdr family oxidoreductaseFSB76_06240O34896Negative1517596 - 151841128602.5
5-dehydro-4-deoxy-d-glucuronate isomeraseFSB76_06245T2KN98Negative1518436 - 151927531355.3
ompa family proteinFSB76_06250P13794Positive1519624 - 152096447576.8

Displaying genes 1241 – 1250 of 6034 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.