Erwinia pyrifoliae Ep1/96

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Erwinia

Description

Erwinia pyrifoliae Ep1/96 is a rod-shaped bacterium notable for its flagella presence, which suggests it possesses motility capabilities. This species is characterized by having five replicons, indicating a complex genomic structure that may contribute to its adaptability and function in various environments. The bacterium has several accessions associated with it, including FP236842.1, FP928999.1, FP236827.1, FP236828.1, and FP236829.1. These accessions provide genetic and genomic data that are valuable for research and understanding the specific traits and behaviors of E. pyrifoliae Ep1/96. In terms of ecological insight, the presence of flagella in E. pyrifoliae Ep1/96 may enhance its ability to colonize plant tissues, which is relevant given its classification within the genus Erwinia, known for its role in plant-pathogenic interactions. The rod shape and motility could facilitate movement towards sites of infection or nutrient availability, influencing its ecological niche and interactions with host plants. Such traits highlight the bacterium's potential impact on agricultural systems, particularly in relation to plant health and disease management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusErwinia
SpeciesErwinia pyrifoliae
StrainEp1/96

Profile

Physiology
Gram staining propertiesNegative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Erwinia pyrifoliae Ep1/96
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Malus domestica, Pyrus communis, Pyrus pyrifolia
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Erwinia pyrifoliae Ep1/96, Complete Genome

Gene Summary

Adenine Count

860 bp

Thymine Count

707 bp

Guanine Count

744 bp

Cytosine Count

759 bp

Genome Length

3070 bp

Protein-coding Genes

4 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
conserved uncharacterized proteinEpC_pEp0260010Not AvailablePositive33 - 64422255.8
uncharacterized proteinEpC_pEp0260020Not AvailablePositive651 - 93210711.0
uncharacterized proteinEpC_pEp0260030Not AvailablePositive1198 - 13956861.17
uncharacterized proteinEpC_pEp0260040Not AvailablePositive1450 - 16898701.48
repressor of primer (rop) proteinEpC_pEp0260050P03051Negative1997 - 22007569.99
uncharacterized proteinEpC_pEp0260060Not AvailableNegative2197 - 23856707.9
conserved uncharacterized proteinEpC_pEp030010Q9I747Positive629 - 111117095.2
glycoside hydrolase (family 19), similar to phage related proteinEpC_pEp030020P44187Positive1125 - 170622103.3
conserved uncharacterized proteinEpC_pEp030030Not AvailableNegative1761 - 230020055.8
rop proteinEpC_pEp030040P03051Positive2562 - 27657569.99

Displaying genes 1 – 10 of 53 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
Metabolite IDMetabolite nameStructureCAS number
BASm0014096Cyclic AMPC10H12N5O6PChemical structure of Cyclic AMPNULL
Average329.2059Da
Monoisotopic329.052519653Da
BASm00345762Fe-2SFe2H8S6Chemical structure of 2Fe-2SNULL
Average312.11Da
Monoisotopic311.764899Da

Displaying 1–2 of 2 metabolites

Health Effects

Health ConditionRelationReference
Fire blightCausesPMC2827408
Fire blight diseaseCausesPMC2827408
Black shoot blightCausesPMC7542023

Displaying health effects 1 – 3 of 3 in total