Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | Not Available | Negative | 769649 - 769756 | 3707.5 |
| hypothetical protein | - | P04043 | Negative | 769979 - 770788 | 31578.7 |
| hypothetical protein | - | Not Available | Positive | 771162 - 771890 | 27874.7 |
| hypothetical protein | - | Q8D5Z6 | Positive | 771912 - 772769 | 33227.4 |
| hypothetical protein | - | Q2YN11 | Positive | 772870 - 773448 | 22905.4 |
| hypothetical protein | - | Not Available | Positive | 773567 - 774211 | 25191.3 |
| hypothetical protein | - | Q00462 | Negative | 774566 - 774763 | 7559.42 |
| hypothetical protein | - | Q00462 | Negative | 774775 - 775212 | 17034.8 |
| hypothetical protein | - | Q9ZDZ8 | Positive | 775654 - 776847 | 44276.5 |
| hypothetical protein | - | Q9ZDL0 | Positive | 778021 - 778401 | 14673.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
