Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
854011 bp
Thymine Count
856242 bp
Guanine Count
377729 bp
Cytosine Count
381821 bp
Genome Length
2469803 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | Positive | 1650949 - 1650960 | Not Available |
| Putative guanosine polyphosphate pyrophospho hydrolase/synthetase | - | O67012 | Negative | 1653327 - 1653902 | 22663.3 |
| hypothetical protein | - | Not Available | Negative | 1654043 - 1654681 | 24880.1 |
| Is1381 transposase protein a | - | Q00462 | Negative | 1655030 - 1655407 | 14572.7 |
| hypothetical protein | - | Not Available | Negative | 1655608 - 1656150 | 21312.1 |
| hypothetical protein | - | Not Available | Positive | 1656422 - 1656691 | 10654.2 |
| Is110-like element is621 family transposase | - | P20665 | Negative | 1656707 - 1656892 | 6954.9 |
| Is110-like element is621 family transposase | - | P19257 | Negative | 1656934 - 1657131 | 6994.78 |
| Is110-like element is621 family transposase | - | P20665 | Negative | 1657088 - 1657660 | 21746.3 |
| hypothetical protein | - | Not Available | Positive | 1657877 - 1658083 | 8396.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
