Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 579869 - 579943 | Not Available |
| hypothetical protein | - | Q92JD0 | Negative | 580027 - 580251 | 8609.27 |
| hypothetical protein | - | B3CV48 | Negative | 580261 - 580548 | 10530.8 |
| hypothetical protein | - | Q68XV0 | Positive | 580792 - 581664 | 32715.9 |
| hypothetical protein | - | Q5HRH0 | Positive | 581682 - 582131 | 16437.5 |
| hypothetical protein | - | Q5HRH0 | Positive | 582131 - 582937 | 30027.5 |
| hypothetical protein | - | Not Available | Positive | 583520 - 584284 | 27589.2 |
| hypothetical protein | - | Q6G6M9 | Negative | 584556 - 585767 | 45648.8 |
| hypothetical protein | - | B3CV53 | Negative | 585793 - 587586 | 67454.1 |
| hypothetical protein | - | B3CV54 | Negative | 587865 - 591332 | 127185.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
