Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | P43672 | Positive | 459532 - 461208 | 63776.9 |
| hypothetical protein | - | Q1RKF9 | Negative | 461655 - 462080 | 15936.4 |
| hypothetical protein | - | O05974 | Negative | 462053 - 463378 | 49825.3 |
| hypothetical protein | - | Q1RKF9 | Negative | 463339 - 464355 | 38814.6 |
| hypothetical protein | - | Q1RKF9 | Negative | 464390 - 465355 | 37075.7 |
| hypothetical protein | - | A5CCE0 | Negative | 465345 - 465980 | 23892.4 |
| hypothetical protein | - | A5CCE0 | Negative | 466001 - 466255 | 9460.71 |
| hypothetical protein | - | A5CCE0 | Negative | 466213 - 467904 | 65259.4 |
| hypothetical protein | - | Q9VHS7 | Positive | 467936 - 468811 | 32680.7 |
| hypothetical protein | - | Not Available | Negative | 469081 - 469842 | 28093.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
