Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | Not Available | Negative | 2049915 - 2050037 | 4724.9 |
| Smf family protein | - | P39813 | Negative | 2050462 - 2051622 | 43103.1 |
| hypothetical protein | - | Not Available | Negative | 2051663 - 2052265 | 22480.8 |
| Is110-like element is621 family transposase | - | P20665 | Positive | 2052597 - 2053559 | 36061.1 |
| hypothetical | - | Not Available | Positive | 2054099 - 2054518 | 16670.7 |
| hypothetical protein | - | Not Available | Positive | 2054898 - 2055287 | 14922.6 |
| hypothetical protein | - | Not Available | Negative | 2056799 - 2056984 | 7345.87 |
| hypothetical protein | - | Not Available | Positive | 2057448 - 2057906 | 17840.5 |
| Putative dna polymerase iii delta prime subunit | - | Q1RI04 | Negative | 2057877 - 2059250 | 51213.7 |
| hypothetical protein | - | Not Available | Negative | 2059259 - 2060059 | 30772.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
