Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna methyltransferase | KARP_02555 | Q58015 | Negative | 2416049 - 2416858 | 31694.8 |
| atp-binding protein | KARP_02556 | P23545 | Positive | 2417225 - 2418001 | 29897.8 |
| atp-binding protein | KARP_02557 | Q8D5Z6 | Positive | 2417976 - 2418833 | 33218.5 |
| (p)pgpp hydrolase | KARP_02558 | Q2YN11 | Positive | 2418934 - 2419509 | 22711.4 |
| uncharacterised protein | KARP_02559 | Not Available | Negative | 2419515 - 2420042 | 19857.4 |
| uncharacterised protein | KARP_02560 | Not Available | Negative | 2420194 - 2420406 | 8486.23 |
| uncharacterised protein | KARP_02561 | Not Available | Negative | 2420549 - 2420917 | 13415.2 |
| uncharacterised protein | KARP_02562 | Not Available | Negative | 2421137 - 2421244 | 4165.16 |
| uncharacterised protein | KARP_02563 | Not Available | Negative | 2421477 - 2422571 | 42216.5 |
| preprotein translocase seca subunit-like protein | KARP_02564 | Q15Q25 | Negative | 2422775 - 2423344 | 20827.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
