Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein traa | KARP_02505 | Q44363 | Negative | 2373333 - 2374592 | 48268.1 |
| conjugative transfer protein | KARP_02506 | Not Available | Positive | 2374871 - 2375065 | 7671.95 |
| conjugal transfer protein trad | KARP_02507 | Not Available | Positive | 2375158 - 2375331 | 6723.12 |
| transposase | KARP_02508 | Not Available | Negative | 2375399 - 2376421 | 38893.5 |
| (p)pgpp hydrolase | KARP_02509 | Q2YN11 | Negative | 2376543 - 2377118 | 22619.2 |
| atp-binding protein | KARP_02510 | Q8D5Z6 | Negative | 2377219 - 2378076 | 33218.5 |
| atp-binding protein | KARP_02511 | P23545 | Negative | 2378051 - 2378827 | 29888.8 |
| uncharacterised protein | KARP_02512 | Not Available | Negative | 2379180 - 2379464 | 11262.8 |
| ankyrin repeat-containing protein | KARP_02513 | Q1RIZ8 | Positive | 2379777 - 2381762 | 75866.5 |
| dna methyltransferase | KARP_02514 | Q58015 | Positive | 2382555 - 2383187 | 25007.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
