Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tpr repeat-containing protein 08 | KARP_02495 | Not Available | Negative | 2362405 - 2363550 | 43705.4 |
| conjugal transfer protein trag | KARP_02496 | Not Available | Negative | 2363566 - 2365536 | 72932.4 |
| is110 family transposase | KARP_02497 | P19257 | Negative | 2365624 - 2366049 | 15616.6 |
| is110 family transposase | KARP_02498 | P20665 | Negative | 2366006 - 2366578 | 21746.3 |
| is5 family transposase isot6 | KARP_02499 | Q00462 | Negative | 2366755 - 2367165 | 15832.5 |
| conjugal transfer protein | KARP_02500 | P09130 | Positive | 2367242 - 2368228 | 36900.4 |
| transposase | KARP_02501 | B7NGZ6 | Negative | 2368238 - 2369257 | 39445.7 |
| conjugal transfer protein trai | KARP_02502 | Not Available | Negative | 2369309 - 2370577 | 46097.0 |
| conjugal transfer protein trai | KARP_02503 | Q44363 | Negative | 2370688 - 2371458 | 28628.5 |
| conjugal transfer protein traa | KARP_02504 | Q44363 | Negative | 2371725 - 2373287 | 59021.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
