Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trac | KARP_02475 | P18004 | Negative | 2339954 - 2342443 | 92778.6 |
| uncharacterised protein | KARP_02476 | Not Available | Negative | 2342424 - 2342753 | 12559.7 |
| conjugal transfer protein | KARP_02477 | P41067 | Negative | 2342753 - 2344078 | 48946.0 |
| uncharacterised protein | KARP_02478 | Not Available | Negative | 2344117 - 2344452 | 11991.1 |
| conjugative transfer protein | KARP_02479 | Not Available | Negative | 2344586 - 2344813 | 8804.07 |
| uncharacterised protein | KARP_02480 | Not Available | Negative | 2344949 - 2345437 | 18462.4 |
| conjugative transfer protein | KARP_02481 | Not Available | Negative | 2345434 - 2345985 | 21027.8 |
| uncharacterised protein | KARP_02482 | Not Available | Negative | 2345985 - 2346308 | 11833.4 |
| peroxiredoxin | KARP_02483 | Q83CY8 | Negative | 2346388 - 2346858 | 17762.4 |
| integrase | KARP_02484 | P10487 | Negative | 2346861 - 2348000 | 43999.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
