Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | KARP_02445 | Not Available | Negative | 2302814 - 2303437 | 24587.7 |
| uncharacterised protein | KARP_02446 | Not Available | Negative | 2303464 - 2305647 | 81011.8 |
| is110 family transposase | KARP_02447 | P20665 | Positive | 2306002 - 2306574 | 21746.3 |
| is110 family transposase | KARP_02448 | P19257 | Positive | 2306531 - 2306956 | 15659.6 |
| uncharacterised protein | KARP_02449 | Not Available | Negative | 2306972 - 2308006 | 38503.2 |
| uncharacterised protein | KARP_02450 | Not Available | Positive | 2308220 - 2309929 | 66693.1 |
| replicative dna helicase | KARP_02451 | Q92HG8 | Positive | 2309938 - 2311386 | 53748.6 |
| (p)pgpp hydrolase | KARP_02452 | O67012 | Positive | 2311619 - 2312194 | 22630.2 |
| ankyrin | KARP_02453 | Q8BLD6 | Positive | 2312229 - 2312873 | 24030.6 |
| membrane protein | KARP_02454 | Not Available | Positive | 2312921 - 2313469 | 20213.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
