Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ankyrin repeat-containing protein | KARP_02265 | Q8BLA8 | Negative | 2126580 - 2128877 | 84287.2 |
| is110 family transposase | KARP_02266 | P19257 | Negative | 2129050 - 2129475 | 15659.6 |
| is110 family transposase | KARP_02267 | P20665 | Negative | 2129432 - 2130004 | 21746.3 |
| is630 family transposase | KARP_02268 | Not Available | Positive | 2130233 - 2130349 | 4206.15 |
| is630 family transposase | KARP_02269 | Not Available | Positive | 2130357 - 2130713 | 14032.4 |
| sodium:proline symporter | KARP_02270 | Q45614 | Positive | 2130935 - 2134372 | 128912.0 |
| transposase | KARP_02271 | Not Available | Negative | 2134985 - 2135860 | 34063.9 |
| uncharacterised protein | KARP_02272 | Not Available | Negative | 2136192 - 2136356 | 6292.58 |
| Trna-ala | Not Available | Not Available | Positive | 2136786 - 2136861 | Not Available |
| uncharacterised protein | KARP_02274 | Not Available | Positive | 2138292 - 2138381 | 3130.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
