Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trai | KARP_02076 | Q44363 | Positive | 1943334 - 1945559 | 83015.1 |
| uncharacterised protein | KARP_02077 | Not Available | Positive | 1945573 - 1945665 | 3652.62 |
| conjugal transfer protein trai | KARP_02078 | Not Available | Positive | 1945866 - 1946123 | 9561.65 |
| transposase | KARP_02079 | B7NGZ6 | Positive | 1946175 - 1947194 | 39457.0 |
| conjugal transfer protein | KARP_02080 | P09130 | Negative | 1947204 - 1948451 | 46686.4 |
| conjugal transfer protein | KARP_02081 | Not Available | Negative | 1948453 - 1948959 | 19585.2 |
| uncharacterised protein | KARP_02082 | Not Available | Negative | 1948965 - 1949099 | 5141.41 |
| conjugal transfer protein trag | KARP_02083 | P33790 | Negative | 1949086 - 1950981 | 69764.3 |
| conjugal transfer protein trah | KARP_02084 | P15069 | Negative | 1950981 - 1952282 | 48294.6 |
| conjugal transfer protein | KARP_02085 | Not Available | Negative | 1952279 - 1952995 | 27695.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
