Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ankyrin repeat-containing protein 16 | KARP_02016 | Q6RI86 | Positive | 1888429 - 1889232 | 30331.8 |
| conjugal transfer protein | KARP_02017 | Not Available | Positive | 1889417 - 1889950 | 20670.3 |
| conjugal transfer protein trah | KARP_02018 | P15069 | Positive | 1890132 - 1891025 | 32622.9 |
| conjugal transfer protein trah | KARP_02019 | Not Available | Positive | 1890979 - 1891434 | 17409.9 |
| conjugal transfer protein trag | KARP_02020 | P33790 | Positive | 1891434 - 1893329 | 69780.3 |
| uncharacterised protein | KARP_02021 | Not Available | Positive | 1893316 - 1893450 | 5141.41 |
| conjugal transfer protein | KARP_02022 | Not Available | Positive | 1893456 - 1893962 | 19585.2 |
| conjugal transfer protein | KARP_02023 | P09130 | Positive | 1893964 - 1895211 | 46686.4 |
| transposase | KARP_02024 | B7NGZ6 | Negative | 1895221 - 1896216 | 38618.8 |
| conjugal transfer protein trai | KARP_02025 | Not Available | Negative | 1896268 - 1897536 | 46097.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
