Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsq | KARP_02006 | Q4UKP2 | Positive | 1879843 - 1880673 | 32078.3 |
| dna replication/repair protein recf | KARP_02007 | Q4UNG8 | Positive | 1880691 - 1881827 | 43438.7 |
| is5 family transposase isot6 | KARP_02008 | Q00462 | Positive | 1882242 - 1882598 | 13798.8 |
| is5 family transposase isot6 | KARP_02009 | Q00462 | Positive | 1882610 - 1882984 | 14653.2 |
| conjugal transfer protein trah | KARP_02010 | Not Available | Positive | 1883818 - 1883967 | 5454.62 |
| is5 family transposase isot6 | KARP_02011 | Not Available | Positive | 1883996 - 1884121 | 4777.02 |
| is5 family transposase isot6 | KARP_02012 | Q00462 | Positive | 1884195 - 1884371 | 6728.2 |
| is5 family transposase isot6 | KARP_02013 | Q00462 | Positive | 1884383 - 1884634 | 9761.15 |
| uncharacterised protein | KARP_02014 | Not Available | Negative | 1885407 - 1887074 | 65010.0 |
| conjugal transfer protein tran | KARP_02015 | P24082 | Positive | 1887635 - 1888270 | 23939.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
