Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (p)pgpp hydrolase | KARP_01946 | O67012 | Positive | 1827090 - 1827665 | 22664.2 |
| ankyrin | KARP_01947 | P46530 | Positive | 1827703 - 1828347 | 23981.5 |
| membrane protein | KARP_01948 | Not Available | Positive | 1828450 - 1828998 | 20202.1 |
| dna methyltransferase | KARP_01949 | Q58015 | Negative | 1829002 - 1829811 | 31610.6 |
| atp-binding protein | KARP_01950 | Not Available | Positive | 1830178 - 1830906 | 27898.7 |
| atp-binding protein | KARP_01951 | P35164 | Positive | 1830928 - 1831785 | 33267.5 |
| (p)pgpp hydrolase | KARP_01952 | Q2YN11 | Positive | 1831886 - 1832461 | 22711.4 |
| uncharacterised protein | KARP_01953 | Not Available | Negative | 1832467 - 1832994 | 19857.4 |
| uncharacterised protein | KARP_01954 | Not Available | Negative | 1833146 - 1833358 | 8486.23 |
| uncharacterised protein | KARP_01955 | Not Available | Negative | 1833501 - 1833869 | 13415.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
