Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | KARP_01936 | Not Available | Negative | 1821127 - 1821456 | 12605.8 |
| conjugal transfer protein | KARP_01937 | P41067 | Negative | 1821456 - 1822091 | 23057.7 |
| conjugal transfer protein | KARP_01938 | Not Available | Negative | 1822139 - 1822783 | 24483.0 |
| uncharacterised protein | KARP_01939 | Not Available | Negative | 1822826 - 1823152 | 11856.8 |
| uncharacterised protein | KARP_01940 | Not Available | Negative | 1823559 - 1824047 | 18614.5 |
| conjugative transfer protein | KARP_01941 | Not Available | Negative | 1824044 - 1824595 | 20999.8 |
| uncharacterised protein | KARP_01942 | Not Available | Negative | 1824595 - 1824918 | 11708.1 |
| integrase | KARP_01943 | P10487 | Negative | 1825060 - 1825737 | 26090.9 |
| integrase | KARP_01944 | Not Available | Negative | 1825983 - 1826291 | 11582.7 |
| uncharacterised protein | KARP_01945 | Not Available | Negative | 1826425 - 1826625 | 7627.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
