Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is110 family transposase | KARP_01926 | P19257 | Negative | 1813922 - 1814347 | 15659.6 |
| is110 family transposase | KARP_01927 | P20665 | Negative | 1814304 - 1814876 | 21746.3 |
| conjugal transfer protein tran | KARP_01928 | Not Available | Negative | 1815107 - 1815217 | 4170.07 |
| conjugal transfer protein tran | KARP_01929 | P24082 | Negative | 1815242 - 1816798 | 59421.7 |
| type-f conjugative transfer system pilin assembly protein trbc | KARP_01930 | P18473 | Negative | 1816795 - 1817178 | 14430.8 |
| conjugal transfer protein | KARP_01931 | P18471 | Negative | 1817201 - 1818145 | 34622.4 |
| uncharacterised protein | KARP_01932 | Not Available | Negative | 1818179 - 1818352 | 6582.16 |
| type-f conjugative transfer system protein traw | KARP_01933 | P18472 | Negative | 1818436 - 1819095 | 24464.1 |
| conjugal transfer protein trac | KARP_01934 | P18004 | Negative | 1819092 - 1820357 | 46706.2 |
| conjugal transfer protein trac | KARP_01935 | Not Available | Negative | 1820463 - 1821146 | 26207.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
