Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hnh endonuclease | KARP_01906 | P19593 | Negative | 1794117 - 1795832 | 66805.4 |
| conjugal transfer protein traa | KARP_01907 | Q44363 | Positive | 1796513 - 1797838 | 50945.0 |
| conjugal transfer protein traa | KARP_01908 | Q44363 | Positive | 1797810 - 1799333 | 57580.9 |
| conjugal transfer protein trai | KARP_01909 | Q44363 | Positive | 1799852 - 1800751 | 33631.9 |
| is630 family transposase | KARP_01910 | Not Available | Negative | 1800765 - 1800971 | 8005.96 |
| is630 family transposase | KARP_01911 | Not Available | Negative | 1801156 - 1801308 | 5914.36 |
| conjugal transfer protein trai | KARP_01912 | Not Available | Positive | 1801352 - 1801768 | 14802.8 |
| conjugal transfer protein trai | KARP_01913 | Not Available | Positive | 1802043 - 1802594 | 20173.2 |
| transposase | KARP_01914 | B7NGZ6 | Positive | 1802646 - 1803593 | 36936.9 |
| conjugal transfer protein | KARP_01915 | P09130 | Negative | 1803603 - 1804850 | 46642.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
