Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | KARP_01776 | Not Available | Negative | 1670780 - 1670980 | 7813.84 |
| is630 family transposase | KARP_01777 | Not Available | Negative | 1671093 - 1671359 | 10568.9 |
| uncharacterised protein | KARP_01778 | Not Available | Negative | 1671494 - 1671622 | 5010.11 |
| transposase | KARP_01779 | Not Available | Positive | 1672231 - 1672626 | 14898.2 |
| rna-binding protein | KARP_01780 | Not Available | Positive | 1673327 - 1674274 | 36486.4 |
| rna-binding protein | KARP_01781 | Not Available | Positive | 1674380 - 1675033 | 25323.0 |
| is5 family transposase isot6 | KARP_01782 | Q00462 | Positive | 1675596 - 1675865 | 10485.7 |
| conjugal transfer protein trai | KARP_01783 | Q44363 | Negative | 1676958 - 1678169 | 45614.9 |
| conjugal transfer protein traa | KARP_01784 | Not Available | Negative | 1678433 - 1679227 | 30098.0 |
| conjugal transfer protein traa | KARP_01785 | Q44349 | Negative | 1679284 - 1680645 | 51619.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
