Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trai | KARP_01710 | Not Available | Positive | 1622847 - 1623398 | 20305.3 |
| transposase | KARP_01711 | B7NGZ6 | Positive | 1623450 - 1624517 | 41090.6 |
| conjugal transfer protein | KARP_01712 | P09130 | Negative | 1624527 - 1626281 | 66315.7 |
| tpr repeat-containing protein 08 | KARP_01713 | Not Available | Negative | 1626287 - 1627432 | 43881.5 |
| conjugal transfer protein trag | KARP_01714 | P33790 | Negative | 1627448 - 1630105 | 98977.8 |
| conjugal transfer protein trah | KARP_01715 | P15069 | Negative | 1630105 - 1631406 | 48125.4 |
| conjugal transfer protein | KARP_01716 | Not Available | Negative | 1631403 - 1632086 | 26421.0 |
| conjugal transfer protein tran | KARP_01717 | P24082 | Negative | 1632098 - 1633792 | 64722.0 |
| type-f conjugative transfer system pilin assembly protein trbc | KARP_01718 | P18473 | Negative | 1633789 - 1634172 | 14387.8 |
| conjugal transfer protein | KARP_01719 | P18471 | Negative | 1634195 - 1634947 | 28162.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
