Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type-f conjugative transfer system pilin assembly protein trbc | KARP_01670 | P18473 | Positive | 1574170 - 1574553 | 14446.8 |
| conjugal transfer protein tran | KARP_01671 | P24082 | Positive | 1574550 - 1576241 | 64721.1 |
| conjugal transfer protein | KARP_01672 | Not Available | Positive | 1576253 - 1576936 | 26315.8 |
| conjugal transfer protein trah | KARP_01673 | P15069 | Positive | 1576933 - 1578234 | 48215.8 |
| conjugal transfer protein trag | KARP_01674 | P33790 | Positive | 1578234 - 1580870 | 97447.3 |
| tpr repeat-containing protein 08 | KARP_01675 | Not Available | Positive | 1580883 - 1582022 | 43482.1 |
| conjugal transfer protein | KARP_01676 | P09130 | Positive | 1582028 - 1583782 | 66304.7 |
| transposase | KARP_01677 | B7NGZ6 | Negative | 1583792 - 1584763 | 37826.7 |
| conjugal transfer protein trai | KARP_01678 | Not Available | Negative | 1584815 - 1585366 | 20305.3 |
| conjugal transfer protein trai | KARP_01679 | Q44363 | Negative | 1585380 - 1587485 | 78537.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
