Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | KARP_01660 | Not Available | Positive | 1565988 - 1566311 | 11708.1 |
| conjugative transfer protein | KARP_01661 | Not Available | Positive | 1566311 - 1566862 | 20999.8 |
| uncharacterised protein | KARP_01662 | Not Available | Positive | 1566859 - 1567347 | 18598.5 |
| uncharacterised protein | KARP_01663 | Not Available | Positive | 1567754 - 1568089 | 11991.1 |
| conjugal transfer protein | KARP_01664 | P41067 | Positive | 1568128 - 1569447 | 48691.5 |
| uncharacterised protein | KARP_01665 | Not Available | Positive | 1569447 - 1569776 | 12573.7 |
| conjugal transfer protein trac | KARP_01666 | P18004 | Positive | 1569757 - 1572249 | 92922.7 |
| type-f conjugative transfer system protein traw | KARP_01667 | P18472 | Positive | 1572246 - 1572905 | 24425.9 |
| uncharacterised protein | KARP_01668 | Not Available | Positive | 1572996 - 1573169 | 6582.16 |
| conjugal transfer protein | KARP_01669 | P18471 | Positive | 1573203 - 1574147 | 34634.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
