Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein | KARP_01600 | Not Available | Positive | 1506036 - 1506482 | 17374.6 |
| conjugal transfer protein | KARP_01601 | P09130 | Positive | 1506454 - 1506789 | 12338.5 |
| conjugal transfer protein | KARP_01602 | P09130 | Positive | 1506744 - 1507730 | 36826.3 |
| transposase | KARP_01603 | B7NGZ6 | Negative | 1507740 - 1508630 | 34348.6 |
| conjugal transfer protein trai | KARP_01604 | Not Available | Negative | 1508657 - 1509925 | 46143.2 |
| conjugal transfer protein trai | KARP_01605 | Q44363 | Negative | 1510036 - 1510806 | 28601.5 |
| conjugal transfer protein traa | KARP_01606 | Q44363 | Negative | 1511073 - 1512311 | 46917.1 |
| conjugal transfer protein traa | KARP_01607 | Q44349 | Negative | 1512308 - 1512634 | 12054.7 |
| conjugal transfer protein traa | KARP_01608 | Q44363 | Negative | 1512680 - 1513927 | 47778.6 |
| conjugative transfer protein | KARP_01609 | Not Available | Positive | 1514227 - 1514439 | 8175.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
